Azure AD Pass-through Authentication on Federated environment

I would like to be able to Azure AD join machines.

My environment is Federated with SAML2 identity provider Internet2 Shibboleth (that does not implement WS-Fed or WS-Trust).

Is it doable to deploy a Pass-through Authentication througth Azure Authentication Agents to allow Azure AD join and Windows logon from joined devices while at the same time doing web authentication (like on https://www.office.com for example) with Internet2 Shibboleth as we are doing now?